Regional assessment of status and trends in PAH concentrations in biota

Overview

This document describes a regional assessment of the status and trends of PAH concentrations in biota in Scottish marine waters. It builds on the assessment of data from the UK’s Clean Seas Environmental Monitoring Programme conducted by the Clean Safe Seas Evidence Group. In this, assessments of status and trends were made for a large number of PAH time series, each of a single PAH in a single species at a single monitoring station. The regional assessment synthesises the results of the individual time series to assess status and trends at the biogeographic regional level.

The regional assessment considers the following PAHs: PA, ANT, FLU, PYR, BAA, CHR, BAP, BGHIP, ICDP.

The regional assessment synthesises data from monitoring stations that are in estuarine, coastal and offshore waters. The results might therefore differ from regional assessments for Marine Strategy Framework Directive purposes, which exclude estuarine stations.

The following sections:

  • summarise the individual time series results
  • describe the methods used to combine the individual time series results to estimate regional status and trends
  • present the estimates of regional trends
  • present the estimates of regional status


Summary of individual time series results

A time series of PAH concentrations is assessed for status if:

  • there is at least one year with data in the period 2013 to 2018
  • there are at least three years of data over the whole time series
  • a parametric model can be fitted to the data and used to estimate the mean concentration in the final monitoring year (or, occasionally, if a non-parametric test of status is applied)

The conditions are more stringent for trends. Specifically, a time series is assessed for trends if:

  • there is at least one year with data in the period 2013 to 2018
  • there are at least five years of data over the whole time series
  • a parametric model can be fitted to the data and used to estimate the trend in mean concentration

Note that all trend assessments for individual time series and most status assessments are based on the fit of a parametric model. This is important because only the parametric results are passed into the regional assessments in the following sections. 3 of the 270 PAH time series were assessed for status using a non-parametric test.

The first tab below shows all the monitoring stations where there are individual time series assessments of trend or status for PAHs. The purple circles are stations where there is a trend assessment for at least one PAH, and the light blue cirles are stations where there are only status assessments.

The next set of tabs show the trend and status assessments for each PAH in turn. The colours have the following meaning:

  • blue: the mean concentration is significantly (p < 0.05) below the Background Assessment Concentration (BAC)
  • green: the mean concentration is significantly (p < 0.05) below the Environmental Assessment Criterion (EAC)
  • orange: there is no EAC and the mean concentration is not significantly below the BAC
  • red: the mean concentration is not signficantly below the EAC

And the shapes have the following meaning:

  • downward triangle: the mean concentration is significantly decreasing (p < 0.05)
  • circle: there is no significant change in mean concentration (p > 0.05)
  • upward triangle: the mean concentration is significantly increasing (p < 0.05)

The final set of tabs give:

  • the number of time series with upwards, downwards or no trend in each biogeographic region
  • the same information presented as proportions
  • the number of time series with blue, green, orange or red status in each biogeographic region
  • the same information presented as proportions

Note that there are no EACs for CHR and ICDP. Time series for these PAHs are only assessed against the BAC, and are coloured blue if significantly below the BAC and orange otherwise. There is also no BAC for ANT, so timeseries for ANT are only assessed against the EAC.


Stations


PA


ANT


FLU


PYR


BAA


CHR


BAP


BGHIP


ICDP


Trend summary (numbers)

Number of time series with upwards, downwards or no trend by biogeographic region

region status PA ANT FLU PYR BAA CHR BAP BGHIP ICDP total
Northern North Sea upward trend 2 0 3 0 1 0 1 0 0 7
no trend 12 8 13 16 3 10 0 5 4 71
downward trend 4 2 2 2 4 0 0 3 2 19
Scottish Continental Shelf upward trend 0 0 2 1 0 0 0 0 0 3
no trend 5 0 3 4 1 0 0 0 0 13
downward trend 0 0 0 0 0 0 0 0 0 0
Minches & W Scotland upward trend 0 0 0 0 0 0 0 0 0 0
no trend 4 0 5 5 1 2 0 1 1 19
downward trend 0 0 0 0 0 0 1 0 0 1
Irish Sea upward trend 2 0 0 0 0 0 0 0 0 2
no trend 5 3 7 8 2 4 0 1 1 31
downward trend 1 0 2 1 3 2 1 4 2 16
total upward trend 4 0 5 1 1 0 1 0 0 12
no trend 26 11 28 33 7 16 0 7 6 134
downward trend 5 2 4 3 7 2 2 7 4 36


Trend summary (proportions)

Proportion of time series with upwards, downwards or no trend by biogeographic region

region status PA ANT FLU PYR BAA CHR BAP BGHIP ICDP total
Northern North Sea upward trend 11 0 17 0 12 0 100 0 0 7
no trend 67 80 72 89 38 100 0 62 67 73
downward trend 22 20 11 11 50 0 0 38 33 20
Scottish Continental Shelf upward trend 0 40 20 0 19
no trend 100 60 80 100 81
downward trend 0 0 0 0 0
Minches & W Scotland upward trend 0 0 0 0 0 0 0 0 0
no trend 100 100 100 100 100 0 100 100 95
downward trend 0 0 0 0 0 100 0 0 5
Irish Sea upward trend 25 0 0 0 0 0 0 0 0 4
no trend 63 100 78 89 40 67 0 20 33 63
downward trend 12 0 22 11 60 33 100 80 67 33
total upward trend 12 0 13 3 6 0 33 0 0 6
no trend 74 85 76 89 47 89 0 50 60 74
downward trend 14 15 11 8 47 11 67 50 40 20


Status summary (numbers)

Number of time series with each status by biogeographic region

region status PA ANT FLU PYR BAA CHR BAP BGHIP ICDP total
Northern North Sea blue 0 0 0 0 0 0 0 0 0 0
green 19 16 16 15 16 0 12 16 0 110
orange 0 0 0 0 0 19 0 0 15 34
red 0 1 3 4 1 0 1 0 0 10
Scottish Continental Shelf blue 0 0 0 0 0 0 0 0 0 0
green 5 0 5 5 2 0 0 0 0 17
orange 0 0 0 0 0 5 0 0 0 5
red 0 0 0 0 0 0 0 0 0 0
Minches & W Scotland blue 1 0 1 2 1 2 1 0 1 9
green 4 5 4 3 0 0 0 1 0 17
orange 0 0 0 0 0 3 0 0 0 3
red 0 0 0 0 0 0 0 0 0 0
Irish Sea blue 0 0 0 0 0 0 0 0 0 0
green 9 8 7 4 4 0 5 5 0 42
orange 0 0 0 0 0 9 0 0 5 14
red 0 1 2 5 1 0 0 0 0 9
total blue 1 0 1 2 1 2 1 0 1 9
green 37 29 32 27 22 0 17 22 0 186
orange 0 0 0 0 0 36 0 0 20 56
red 0 2 5 9 2 0 1 0 0 19


Status summary (proportions)

Proportion of time series with each status by biogeographic region

region status PA ANT FLU PYR BAA CHR BAP BGHIP ICDP total
Northern North Sea blue 0 0 0 0 0 0 0 0 0 0
green 100 94 84 79 94 0 92 100 0 71
orange 0 0 0 0 0 100 0 0 100 22
red 0 6 16 21 6 0 8 0 0 7
Scottish Continental Shelf blue 0 0 0 0 0 0
green 100 100 100 100 0 77
orange 0 0 0 0 100 23
red 0 0 0 0 0 0
Minches & W Scotland blue 20 0 20 40 100 40 100 0 100 31
green 80 100 80 60 0 0 0 100 0 59
orange 0 0 0 0 0 60 0 0 0 10
red 0 0 0 0 0 0 0 0 0 0
Irish Sea blue 0 0 0 0 0 0 0 0 0 0
green 100 89 78 44 80 0 100 100 0 65
orange 0 0 0 0 0 100 0 0 100 21
red 0 11 22 56 20 0 0 0 0 14
total blue 3 0 3 5 4 5 5 0 5 3
green 97 94 84 71 88 0 90 100 0 69
orange 0 0 0 0 0 95 0 0 95 21
red 0 6 13 24 8 0 5 0 0 7


Regional assessment - methods

Tabulating the number of time series with each status category by region provides a quick summary of the individual time series results. However, it does not provide an objective regional assessment of status. Similarly, tabulating the number of time series with an upward or downward trend does not provide an objective regional assessment of trend. This section describes how the individual time series results can by synthesised in a meta-analysis to assess both status and trend at the regional level.

Trends

For a regional trend assessment, the trend in each time series is summarised by the estimated change in log concentration over the last twenty years (or shorter if the time series doesn’t extend that far back). Regional trends are then estimated by fitting the following linear mixed model by restricted maximum likelihood:

  • response: trend (yearly change in log concentration)
  • fixed model: region
  • random model: PAH + region.PAH + station + trend estimation variation + residual variation

The fixed model means that a trend is estimated for each region. Trends in the different PAHs are assumed to be broadly similar, because inputs and control measures are likely to affect all PAHs in a similar way. Each regional trend can thus be interpreted as the common trend in PAH concentrations in that region (i.e. the trend averaged across all PAHs).

The random model has five terms:

  • PAH allows for variation in trend between PAHs common to all regions
  • region.PAH allows for additional variation in trend between PAHs within regions
  • station allows for variation in trend between stations common to all PAHs
  • trend estimation variation is the variance of the trend estimates from the individual time series analysis, assumed known and fixed
  • residual variation is the variation that cannot be explained by any of the fixed effects or the other random effects

The meta-analysis is restricted to time series from monitoring stations that are classified as ‘representative’. ‘Baseline’ stations (those with near pristine conditions or only subject to very diffuse inputs) are omitted because any trends there will likely be caused by different processes to those at representative stations. Similarly ‘impacted’ stations (those close to a point source) are omitted because trends there will likely reflect changes due to the point source, and will be ‘unrepresentative’ at the regional level.

The meta-analysis is further restricted to:

  • regions with at least three trend stations with good geographic spread. Three stations is considered the minimum required to provide some sort of evidence base at the regional level
  • PAHs with trend information for at least three stations (over all regions): PAHs are treated as random effects in the meta-anlaysis, so information about trends in one PAH can be ‘borrowed’ from the trend information in the other PAHs

Status

For a regional status assessment, the status of each time series is summarised by the difference between the estimated mean log concentration in the final monitoring year and the log assessment concentration. This ensures that status is always measured on the same scale, even though the assessment concentration might vary between PAHs and species. Essentially the same linear mixed model as for trends is then fitted:

  • response: status (mean log concentration - log assessment concentration)
  • fixed model: region
  • random model: PAH + region.PAH + station + status estimation variation + residual variation

where status estimation variation is the variation in the status estimates from the individual time series analysis, assumed known and fixed.

There are no restrictions on the time series used in the status meta-analysis based on the classification of the monitoring station; time series from baseline, representative and impacted stations are all included. However, the few time series with a non-parametric assessment of status must be excluded, because there is no summary measure of status to use in the mixed model.

Again, the meta-analysis is restricted to regions with at least three status stations with good geographic spread and to PAHs with status information for at least three stations (over all regions).

Presentation

The results of both the trend and status regional assessments are back-transformed for presentation. The estimated regional trend is then interpreted as the percentage yearly change in concentration and the estimated regional status as the ratio of the mean regional concentration to the assessment concentration. To illustrate the latter, a value of 1 indicates that the mean regional concentration is equal to the assessment concentration; a value of 0.5 indicates that it is half the assessment concentration, and a value of 2 indicates that it is twice the assessment concentration.


Regional assessment - availability of time series

This section provides more detail on the number and geographic spread of the time series available for the meta-analyses. The map shows the stations with parametric trend and status assessments having excluded trend assessments at baseline and impacted stations. The purple circles are stations where there is a trend assessment for at least one PAH, and the light blue cirles are stations where there are only status assessments.

The following regions have an insufficient number or time series or spread of stations and are excluded from the regional assessment:

  • trend: Scottish Continental Shelf
  • status: Scottish Continental Shelf



Regional trends

The first 4 tabs show:

  • Regional trends: estimates of the regional trend (averaged over PAHs) with pointwise 95% confidence intervals
  • Regional trends by PAH: regional trend estimates for each PAH with pointwise 95% confidence intervals plotted by PAH
  • Regional trends by region: regional trend estimates for each PAH with pointwise 95% confidence intervals plotted by region
  • Individual time series: the trend estimates from the individual time series on which the regional assessment is based. The estimates for regions with insufficient geographic spread (and excluded from the meta-analysis) are also shown.

The symbols in all these plots have the following interpretation:

  • downward triangle: the mean concentration is significantly decreasing (p < 0.05)
  • circle: there is no change in mean concentration (p > 0.05)
  • upward triangle: the mean concentration is significantly increasing (p < 0.05)

The final 2 tabs show the estimates of the regional trend (averaged over PAHs) and the regional trend by PAH


Regional trends


Regional trends by PAH


Regional trends by region


Individual time series


Estimates by region

This table shows the estimates of the regional trend:

  • trend: the estimated mean yearly change in log concentration across the region (multiplied by 100 for presentation)
  • se: the corresponding standard error
  • lower, upper: the corresponding pointwise 95% confidence limits
  • % yearly change: the estimated mean % yearly change in concentration across the region
  • %yc lower, %yc upper: the corresponding pointwise 95% confidence limits


region trend se lower upper % yearly change %yc lower %yc upper
Northern North Sea -4.44 1.67 -7.70 -1.17 -4.34 -7.41 -1.16
Minches & W Scotland 1.07 2.90 -4.62 6.75 1.07 -4.52 6.99
Irish Sea -3.08 2.17 -7.33 1.17 -3.03 -7.07 1.18


Estimates by region and PAH

This table shows the estimates of the regional trend by determinand:

  • trend: the estimated mean yearly change in log concentration across the region (multiplied by 100 for presentation)
  • se: the corresponding standard error
  • lower, upper: the corresponding pointwise 95% confidence limits
  • % yearly change: the estimated mean % yearly change in concentration across the region
  • %yc lower, %yc upper: the corresponding pointwise 95% confidence limits


region PAH trend se lower upper % yearly change %yc lower %yc upper
Northern North Sea PA -3.20 1.60 -6.34 -0.05 -3.15 -6.14 -0.05
ANT -3.62 1.99 -7.53 0.28 -3.56 -7.26 0.28
FLU -1.18 1.57 -4.25 1.89 -1.18 -4.16 1.90
PYR -2.49 1.54 -5.51 0.52 -2.46 -5.36 0.52
BAA -6.81 1.78 -10.29 -3.33 -6.58 -9.78 -3.28
CHR -4.10 1.94 -7.90 -0.29 -4.01 -7.60 -0.29
BAP -2.51 2.31 -7.04 2.01 -2.48 -6.80 2.03
BGHIP -7.36 1.85 -10.98 -3.74 -7.10 -10.40 -3.67
ICDP -8.64 2.03 -12.62 -4.65 -8.27 -11.86 -4.54
Minches & W Scotland PA 3.47 3.10 -2.60 9.54 3.53 -2.57 10.01
FLU 3.39 2.85 -2.20 8.99 3.45 -2.17 9.40
PYR 1.66 2.89 -4.01 7.33 1.67 -3.93 7.61
BAA -0.70 3.28 -7.13 5.73 -0.70 -6.88 5.90
CHR 0.80 3.16 -5.39 6.99 0.80 -5.25 7.24
BAP 1.23 3.42 -5.47 7.93 1.24 -5.32 8.25
BGHIP -0.68 3.26 -7.07 5.71 -0.68 -6.82 5.88
ICDP -1.40 3.33 -7.92 5.13 -1.39 -7.62 5.26
Irish Sea PA -0.40 2.32 -4.94 4.14 -0.40 -4.82 4.22
ANT -2.05 2.70 -7.35 3.25 -2.03 -7.09 3.30
FLU -1.60 2.16 -5.84 2.64 -1.58 -5.67 2.68
PYR -1.95 2.23 -6.31 2.41 -1.93 -6.12 2.44
BAA -5.14 2.32 -9.69 -0.60 -5.01 -9.23 -0.60
CHR -4.70 2.32 -9.25 -0.16 -4.59 -8.83 -0.16
BAP -1.24 2.63 -6.39 3.91 -1.23 -6.19 3.99
BGHIP -4.53 2.26 -8.95 -0.11 -4.43 -8.56 -0.11
ICDP -6.11 2.57 -11.14 -1.08 -5.93 -10.55 -1.08


Regional status compared to the Environmental Assessment Criterion (EAC)

The first 4 tabs show:

  • Regional status: estimates of the regional status (averaged over PAHs) with pointwise upper one-sided 95% confidence intervals
  • Regional status by PAH: regional status estimates for each PAH with pointwise upper one-sided 95% confidence intervals plotted by PAH
  • Regional status by region: regional status estimates for each PAH with pointwise upper one-sided 95% confidence intervals plotted by region
  • Individual time series: the status estimates from the individual time series on which the regional assessment is based. The estimates for regions with insufficient geographic spread (and excluded from the meta-analysis) are also shown.

The symbols in all the plots have the following interpretation:

  • blue: the mean concentration is significantly (p < 0.05) below the Background Assessment Concentration (BAC)
  • green: the mean concentration is significantly (p < 0.05) below the EAC
  • red: the mean concentration is not significantly below the EAC

Note that to see why some points are coloured blue, it is necessary to look ahead to the next section, where status is compared to the BAC. Unfortunately, it isn’t easy to present the assessment of status relative to the EAC with the assessment of status relative to the BAC because the ratio of the BAC to the EAC can vary between PAHs and species.

The final 2 tabs show the estimates of the regional status (averaged over PAHs) and the regional status trend by PAH


Regional status


Regional status by PAH


Regional status by region


Individual time series


Estimates by region

This table shows the estimates of the regional status:

  • status: the estimated mean log concentration minus the log EAC
  • se: the corresponding standard error
  • upper: the corresponding pointwise upper one-sided 95% confidence limit
  • concentration: the estimated mean concentration relative to the EAC
  • conc upper: the corresponding pointwise upper one-sided 95% confidence limit


region status se upper concentration conc upper
Northern North Sea -2.93 0.57 -1.99 0.05 0.14
Minches & W Scotland -3.43 0.64 -2.38 0.03 0.09
Irish Sea -2.24 0.60 -1.25 0.11 0.29


Estimates by region and PAH

This table shows the estimates of the regional trend by determinand:

  • status: the estimated mean log concentration minus the log EAC
  • se: the corresponding standard error
  • upper: the corresponding pointwise upper one-sided 95% confidence limit
  • concentration: the estimated mean concentration relative to the EAC
  • conc upper: the corresponding pointwise upper one-sided 95% confidence limit


region PAH status se upper concentration conc upper
Northern North Sea PA -4.45 0.19 -4.14 0.01 0.02
ANT -4.19 0.21 -3.85 0.02 0.02
FLU -1.31 0.19 -1.00 0.27 0.37
PYR -1.29 0.19 -0.99 0.27 0.37
BAA -2.15 0.19 -1.83 0.12 0.16
CHR
BAP -4.45 0.20 -4.12 0.01 0.02
BGHIP -2.65 0.20 -2.33 0.07 0.10
ICDP
Minches & W Scotland PA -4.78 0.36 -4.19 0.01 0.02
ANT -4.77 0.36 -4.17 0.01 0.02
FLU -1.79 0.35 -1.21 0.17 0.30
PYR -1.89 0.35 -1.31 0.15 0.27
BAA -2.71 0.39 -2.06 0.07 0.13
CHR
BAP -5.00 0.40 -4.35 0.01 0.01
BGHIP -3.08 0.39 -2.44 0.05 0.09
ICDP
Irish Sea PA -3.95 0.27 -3.51 0.02 0.03
ANT -3.74 0.28 -3.29 0.02 0.04
FLU -0.64 0.27 -0.20 0.53 0.82
PYR -0.53 0.27 -0.08 0.59 0.92
BAA -1.33 0.28 -0.86 0.26 0.42
CHR
BAP -3.53 0.28 -3.07 0.03 0.05
BGHIP -1.93 0.28 -1.47 0.15 0.23
ICDP


Regional status compared to the Background Assessment Concentration (BAC)

The first 4 tabs show:

  • Regional status: estimates of the regional status (averaged over PAHs) with pointwise upper one-sided 95% confidence intervals
  • Regional status by PAH: regional status estimates for each PAH with pointwise upper one-sided 95% confidence intervals plotted by PAH
  • Regional status by region: regional status estimates for each PAH with pointwise upper one-sided 95% confidence intervals plotted by region
  • Individual time series: the status estimates from the individual time series on which the regional assessment is based. The estimates for regions with insufficient geographic spread (and excluded from the meta-analysis) are also shown.

The symbols in all the plots have the following interpretation:

  • blue: the mean concentration is significantly (p < 0.05) below the BAC
  • green: the mean concentration is significantly (p < 0.05) below the Environmental Assessment Criterion (EAC)
  • orange: there is no EAC and the mean concentration is not significantly below the BAC
  • red: the mean concentration is not significantly below the EAC

The final 2 tabs show the estimates of the regional status (averaged over PAHs) and the regional status trend by PAH


Regional status


Regional status by PAH


Regional status by region


Individual time series


Estimates by region

This table shows the estimates of the regional status:

  • status: the estimated mean log concentration minus the log BAC
  • se: the corresponding standard error
  • upper: the corresponding pointwise upper one-sided 95% confidence limit
  • concentration: the estimated mean concentration relative to the BAC
  • conc upper: the corresponding pointwise upper one-sided 95% confidence limit


region status se upper concentration conc upper
Northern North Sea 1.01 0.20 1.34 2.73 3.82
Minches & W Scotland 0.51 0.34 1.07 1.66 2.92
Irish Sea 1.69 0.27 2.13 5.43 8.41


Estimates by region and PAH

This table shows the estimates of the regional trend by determinand:

  • status: the estimated mean log concentration minus the log BAC
  • se: the corresponding standard error
  • upper: the corresponding pointwise upper one-sided 95% confidence limit
  • concentration: the estimated mean concentration relative to the BAC
  • conc upper: the corresponding pointwise upper one-sided 95% confidence limit


region PAH status se upper concentration conc upper
Northern North Sea PA 0.58 0.18 0.87 1.79 2.39
ANT
FLU 0.89 0.17 1.18 2.45 3.26
PYR 1.11 0.17 1.39 3.02 4.03
BAA 1.30 0.18 1.59 3.65 4.92
CHR 0.88 0.17 1.16 2.40 3.20
BAP 1.59 0.19 1.90 4.91 6.66
BGHIP 1.09 0.18 1.39 2.98 4.02
ICDP 0.61 0.18 0.91 1.84 2.49
Minches & W Scotland PA 0.10 0.33 0.64 1.10 1.89
ANT
FLU 0.40 0.32 0.93 1.49 2.54
PYR 0.60 0.32 1.13 1.82 3.11
BAA 0.79 0.33 1.34 2.20 3.81
CHR 0.38 0.32 0.92 1.47 2.50
BAP 1.09 0.34 1.64 2.96 5.15
BGHIP 0.60 0.33 1.15 1.81 3.14
ICDP 0.12 0.34 0.67 1.12 1.95
Irish Sea PA 1.24 0.25 1.65 3.45 5.19
ANT
FLU 1.58 0.24 1.98 4.85 7.25
PYR 1.81 0.25 2.21 6.09 9.13
BAA 1.99 0.25 2.40 7.29 11.05
CHR 1.57 0.24 1.98 4.83 7.22
BAP 2.29 0.25 2.71 9.92 15.05
BGHIP 1.77 0.25 2.19 5.88 8.91
ICDP 1.28 0.26 1.70 3.60 5.48


PAH profiles

The profile of concentrations across PAHs can sometimes be useful for examining sources, and for comparing concentrations across regions where assessment criteria are not available. Profiles were examined by fitting the following linear mixed model by restricted maximum likelihood:

  • response: mean log concentration
  • fixed model: region
  • random model: PAH + region.PAH + station + estimation variation + residual variation

where, for each time series, the mean log concentration is the estimated mean log concentration in the final monitoring year and the estimation variance is the variance associated with this estimate.

The estimated PAH concentration profiles by region are shown below with pointwise 95% confidence limits. The units are ug/kg ww.